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 | Acesso ao texto completo restrito à biblioteca da Embrapa Agroenergia. Para informações adicionais entre em contato com cnpae.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Agroenergia. |
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Data corrente: |
22/08/2023 |
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Data da última atualização: |
19/04/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ABREU, C. G. de; ROESCH, L. F. W.; ANDREOTE, F. D.; SILVA, S. R.; MORAES, T. S. J. de; ZIED, D. C.; SIQUEIRA, F. G. de; DIAS, E. S.; VARANI, A. M.; PYLRO, V. S. |
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Afiliação: |
CARLOS GODINHO DE ABREU, FEDERAL UNIVERSITY OF LAVRAS; LUIZ FERNANDO WURDIG ROESCH, UNIVERSITY OF FLORIDA; FERNANDO DINI ANDREOTE, “LUIZ DE QUEIROZ” COLLEGE OF AGRICULTURE, UNIVERSITY OF SÃO PAULO; SAURA RODRIGUES SILVA, UNIVERSITY OF FLORIDA; TATIANA SILVEIRA JUNQUEIRA DE MORAES, FEDERAL UNIVERSITY OF LAVRAS; DIEGO CUNHA ZIED, SÃO PAULO STATE UNIVERSITY (UNESP); FELIX GONCALVES DE SIQUEIRA, CNPAE; EUSTÁQUIO SOUZA DIAS, FEDERAL UNIVERSITY OF LAVRAS; ALESSANDRO M. VARANI, SÃO PAULO STATE UNIVERSITY (UNESP); VICTOR SATLER PYLRO, FEDERAL UNIVERSITY OF LAVRAS. |
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Título: |
Decoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens: A Resource for fungal biology and biotechnology. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Research in Microbiology, v. 174, n. 8, 104116, 2023. |
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DOI: |
https://doi.org/10.1016/j.resmic.2023.104116 |
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Idioma: |
Inglês |
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Conteúdo: |
Agaricus subrufescens, also known as the "sun mushroom," has significant nutritional 27 and medicinal value. However, its short shelf life due to the browning process results 28 in post-harvest losses unless it's quickly dehydrated. This restricts its availability to 29 consumers in the form of capsules. A genome sequence of A. subrufescens may lead 30 to new cultivation alternatives or the application of gene editing strategies to delay the 31 browning process. We assembled a chromosome-scale genome using a hybrid 32 approach combining Illumina and Nanopore sequencing. The genome was assembled 33 into 13 chromosomes and 31 unplaced scaffolds, totaling 44.5 Mb with 96.5% 34 completeness and 47.24% GC content. 14,332 protein-coding genes were identified, 35 with 64.6% of the genome covered by genes and 23.41% transposable elements. The mitogenome was circularized and encoded fourteen typical mitochondrial genes. Four polyphenol oxidase (PPO) genes and the Mating-type locus were identified. Phylogenomic analysis supports the placement of A. subrufescens in the Agaricomycetes clade. This is the first available genome sequence of a strain of the "sun mushroom." Results are available through a Genome Browser (https://plantgenomics.ncc.unesp.br/gen.php?id=Asub) and can support further fungal biological and genomic studies. |
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Thesaurus Nal: |
Agaricus subrufescens. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02153naa a2200253 a 4500
001 2156053
005 2024-04-19
008 2023 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1016/j.resmic.2023.104116$2DOI
100 1 $aABREU, C. G. de
245 $aDecoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens$bA Resource for fungal biology and biotechnology.$h[electronic resource]
260 $c2023
520 $aAgaricus subrufescens, also known as the "sun mushroom," has significant nutritional 27 and medicinal value. However, its short shelf life due to the browning process results 28 in post-harvest losses unless it's quickly dehydrated. This restricts its availability to 29 consumers in the form of capsules. A genome sequence of A. subrufescens may lead 30 to new cultivation alternatives or the application of gene editing strategies to delay the 31 browning process. We assembled a chromosome-scale genome using a hybrid 32 approach combining Illumina and Nanopore sequencing. The genome was assembled 33 into 13 chromosomes and 31 unplaced scaffolds, totaling 44.5 Mb with 96.5% 34 completeness and 47.24% GC content. 14,332 protein-coding genes were identified, 35 with 64.6% of the genome covered by genes and 23.41% transposable elements. The mitogenome was circularized and encoded fourteen typical mitochondrial genes. Four polyphenol oxidase (PPO) genes and the Mating-type locus were identified. Phylogenomic analysis supports the placement of A. subrufescens in the Agaricomycetes clade. This is the first available genome sequence of a strain of the "sun mushroom." Results are available through a Genome Browser (https://plantgenomics.ncc.unesp.br/gen.php?id=Asub) and can support further fungal biological and genomic studies.
650 $aAgaricus subrufescens
700 1 $aROESCH, L. F. W.
700 1 $aANDREOTE, F. D.
700 1 $aSILVA, S. R.
700 1 $aMORAES, T. S. J. de
700 1 $aZIED, D. C.
700 1 $aSIQUEIRA, F. G. de
700 1 $aDIAS, E. S.
700 1 $aVARANI, A. M.
700 1 $aPYLRO, V. S.
773 $tResearch in Microbiology$gv. 174, n. 8, 104116, 2023.
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Registro original: |
Embrapa Agroenergia (CNPAE) |
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| Registros recuperados : 3 | |
| 1. |  | PIZAURO, L. J. L.; ALMEIDA, C. C. de; GOHARI, I. M.; MACINNES, J. I.; ZAFALON, L. F.; KROPINSKI, A. M.; VARANI, A. M. Complete genome sequences of 11 Staphylococcus sp. Strains Isolated from buffalo milk and milkers? hands. Microbiology Resource Announcements, v. 8, n. 47, e01264-19, nov. 2019. 3 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 2 |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 2. | | ABREU, V. A. C. de; ALVES, R. M.; SILVA, S. R.; FERRO, J. A.; DOMINGUES, D. S.; MIRANDA, V. F. O.; VARANI, A. M. Comparative analyses of Theobroma cacao and T. grandiflorum mitogenomes reveal conserved gene content embedded within complex and plastic structures. Gene, v. 849, 146904, 2023.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 3. | | ABREU, C. G. de; ROESCH, L. F. W.; ANDREOTE, F. D.; SILVA, S. R.; MORAES, T. S. J. de; ZIED, D. C.; SIQUEIRA, F. G. de; DIAS, E. S.; VARANI, A. M.; PYLRO, V. S. Decoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens: A Resource for fungal biology and biotechnology. Research in Microbiology, v. 174, n. 8, 104116, 2023.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 3 |
| Biblioteca(s): Embrapa Agroenergia. |
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| Registros recuperados : 3 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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